Data (data.R)ΒΆ

Loads data sets available for use. These include:

  • "gene_set": These are a collection of gene sets as used in the Lamb 2006 CMap paper.

  • "cdesc_char": An example table of metadata, as would be parsed from a text file or using parse.gctx.

    Warning

    Initially, all columns are of type character.

  • "ds": An example of a GCT object with row and column data, and gene expression values in the matrix.